suprising... so I tried to put some of the information together and then figure this out, here is what I see. As someone pointed out, the sim does each at bat, not each pitch, therefore it must use a weighted average of all pitches, so I made my own. The first weighting numbers I guessed were .4, .3, .2, .15, .1. If the pitcher doesn't have 5 pitches, then you only use the pitch weighting for the pitches they have. Using these numbers, I got 65.17 for pitcher A and 67.56 for pitcher B. Slight advantage to pitcher B.
Now, what I imagine is, if you have a high pitch calling catcher then the weightings change, putting more emphasis on better pitches, so I changed my weights to .6, .4, .15, .1, .05, and then the averages were 69.77 vs 69.61, slight advantage to A.
This has opened up my thought about Catchers, that a defensive catcher might be more important to specific pitchers. In my example above the "better" catcher increased A's numbers by 7% and B's numbers by 3%, now I know my numbers are not accurate, but the thought process seems to be, meaning that I should put my defensive catcher in on days that he has a better chance of effecting the game...
Any thoughts?