Did you set the -Team/League/Division:  setting for "based on theme options"?

I'm not sure what you're talking about.  Where is that?  

And why wouldn't the draft be based on theme options?  If you set up a theme league, isn't it understood that you want the live draft to follow theme rules?

In your draft center to the right of last name.

Yes, I see it now, thanks.  

Still two problems remain: Even when I set it to Based on Theme Options, I can see ineligible players in my searches.  Will those players disappear once the season begins?

And second, is this a setting that every owner will have to click on himself when drafting?  It would seem to make more sense to have this be automatic if you're in a theme league with its own theme rules.

Admin says it was a bug with the blacklist feature.  They switched the whole thing over to a whitelist and it seems to be okay now.